Emission cross sections for energetic O+^+(4S,2D,2P^4S,^2D,^2P)-N2_2 collisions

We report measurements of excitation functions for the O$^{+}-$N$_{2}$ process with the incident beam of $1-10$ keV O$^{+}$ in the ground O$^{+}(^{4}S)$ and metastable O$^{+}(^{2}D)$ and O$^{+}(^{2}P)$ states. The measurements are performed with the sufficiently high energy resolution of 0.001 eV, which allows to distinguish the excitation channels. The excitation cross section induced by incident ions in the metastable state O$^{+}(^{2}P)$ is much larger than that for the ground O$^{+}(^{4}S)$. The excitation cross section of N$_{2}^{+}$ ion for (0,0), (0,1) and (1,2) bands system is measured and the ratio of intensities for these bands is established as $10:3:1.$ It is shown that the cross sections for the N$^{+^{\ast }}$ions excitations in the dissociative charge exchange processes increase with the increase of the incident ion energy. The energy dependence of the excitation cross section of the band (0,0) $\lambda=391.4$ nm of the first negative system of the N$_{2}^{+}$ and degree of polarization of radiation in O$^{+}-$N$_{2}$ collision are measured for the first time. An influence of an admixture of the ion metastable state on a degree of polarization is revealed. It is demonstrated that for O$^{+}-$N$_{2}$ collision system the degree of polarization by metastable O$^{+}$($^{2}P$) ions is less compared to those that are in the ground O$^{+}$($^{4}S$) state and the sign of polarization degree of excited molecular ions does not change.Comment: 15 pages, 8 Figure

Electron-impact ionization and ionic fragmentation of O2_{2} from threshold to 120 eV energy range

We study the electron-impact induced ionization of O$_{2}$ from threshold to 120 eV using the electron spectroscopy method. Our approach is simple in concept and embodies the ion source with a collision chamber and a mass spectrometer with a quadruple filter as a selector for the product ions. The combination of these two devices makes it possible to unequivocally collect all energetic fragment ions formed in ionization and dissociative processes and to detect them with known efficiency. The ion source allows to vary and tune the electron-impact ionization energy and the target-gas pressure. We demonstrate that for obtaining reliable results of cross sections for inelastic processes and determining mechanisms for the formation of O$^{+}$($^{4}S,^2{D},^2{P}$) ions, it is crucial to control the electron-impact energy for production of ion and the pressure in the ion source. A comparison of our results with other experimental and theoretical data shows good agreement and proves the validity of our approach.Comment: 11 pages, 7 figures. arXiv admin note: substantial text overlap with arXiv:1905.0114

Fully Differential Investigation of Two-Center Interference in Dissociative Capture in p + H₂ Collisions

We have measured and calculated fully differential cross sections for vibrational dissociation following capture in 75-keV p + H2 collisions. For a molecular orientation perpendicular to the projectile beam axis and parallel to the transverse momentum transfer we observe a pronounced interference structure. The positions of the interference extrema suggest that the interference term is afflicted with a phase shift which depends on the projectile scattering angle. However, no significant dependence on the kinetic-energy release was observed. Considerable discrepancies between our calculations and experimental data were found

Target Dependence of Postcollision Interaction Effects on Fully Differential Ionization Cross Sections

We have measured and calculated fully differential cross sections (FDCS) for ionization of helium by 75-keV proton impact. Ejected electrons with a speed close to and above the projectile speed were investigated. This range of kinematics represents a largely unexplored regime. A high sensitivity of the FDCS to the details of the description of the few-body dynamics, reported earlier for ionization of H2, was confirmed. A peak structure was found in an electron angular range between the regions where the so-called binary and recoil peaks are usually observed. The need for nonperturbative calculations using a two-center basis set is demonstrated

The Echinococcus canadensis (G7) genome: A key knowledge of parasitic platyhelminth human diseases

Background: The parasite Echinococcus canadensis (G7) (phylum Platyhelminthes, class Cestoda) is one of the causative agents of echinococcosis. Echinococcosis is a worldwide chronic zoonosis affecting humans as well as domestic and wild mammals, which has been reported as a prioritized neglected disease by the World Health Organisation. No genomic data, comparative genomic analyses or efficient therapeutic and diagnostic tools are available for this severe disease. The information presented in this study will help to understand the peculiar biological characters and to design species-specific control tools. Results: We sequenced, assembled and annotated the 115-Mb genome of E. canadensis (G7). Comparative genomic analyses using whole genome data of three Echinococcus species not only confirmed the status of E. canadensis (G7) as a separate species but also demonstrated a high nucleotide sequences divergence in relation to E. granulosus (G1). The E. canadensis (G7) genome contains 11,449 genes with a core set of 881 orthologs shared among five cestode species. Comparative genomics revealed that there are more single nucleotide polymorphisms (SNPs) between E. canadensis (G7) and E. granulosus (G1) than between E. canadensis (G7) and E. multilocularis. This result was unexpected since E. canadensis (G7) and E. granulosus (G1) were considered to belong to the species complex E. granulosus sensu lato. We described SNPs in known drug targets and metabolism genes in the E. canadensis (G7) genome. Regarding gene regulation, we analysed three particular features: CpG island distribution along the three Echinococcus genomes, DNA methylation system and small RNA pathway. The results suggest the occurrence of yet unknown gene regulation mechanisms in Echinococcus. Conclusions: This is the first work that addresses Echinococcus comparative genomics. The resources presented here will promote the study of mechanisms of parasite development as well as new tools for drug discovery. The availability of a high-quality genome assembly is critical for fully exploring the biology of a pathogenic organism. The E. canadensis (G7) genome presented in this study provides a unique opportunity to address the genetic diversity among the genus Echinococcus and its particular developmental features. At present, there is no unequivocal taxonomic classification of Echinococcus species; however, the genome-wide SNPs analysis performed here revealed the phylogenetic distance among these three Echinococcus species. Additional cestode genomes need to be sequenced to be able to resolve their phylogeny.Fil: Maldonado, Lucas Luciano. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Houssay. Instituto de Investigaciones en Microbiología y Parasitología Médica. Universidad de Buenos Aires. Facultad de Medicina. Instituto de Investigaciones en Microbiología y Parasitología Médica; ArgentinaFil: Assis, Juliana. Fundación Oswaldo Cruz; BrasilFil: Gomes Araújo, Flávio M.. Fundación Oswaldo Cruz; BrasilFil: Salim, Anna C. M.. Fundación Oswaldo Cruz; BrasilFil: Macchiaroli, Natalia. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Houssay. Instituto de Investigaciones en Microbiología y Parasitología Médica. Universidad de Buenos Aires. Facultad de Medicina. Instituto de Investigaciones en Microbiología y Parasitología Médica; ArgentinaFil: Cucher, Marcela Alejandra. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Houssay. Instituto de Investigaciones en Microbiología y Parasitología Médica. Universidad de Buenos Aires. Facultad de Medicina. Instituto de Investigaciones en Microbiología y Parasitología Médica; ArgentinaFil: Camicia, Federico. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Houssay. Instituto de Investigaciones en Microbiología y Parasitología Médica. Universidad de Buenos Aires. Facultad de Medicina. Instituto de Investigaciones en Microbiología y Parasitología Médica; ArgentinaFil: Fox, Adolfo. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Houssay. Instituto de Investigaciones en Microbiología y Parasitología Médica. Universidad de Buenos Aires. Facultad de Medicina. Instituto de Investigaciones en Microbiología y Parasitología Médica; ArgentinaFil: Rosenzvit, Mara Cecilia. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Houssay. Instituto de Investigaciones en Microbiología y Parasitología Médica. Universidad de Buenos Aires. Facultad de Medicina. Instituto de Investigaciones en Microbiología y Parasitología Médica; ArgentinaFil: Oliveira, Guilherme. Instituto Tecnológico Vale; Brasil. Fundación Oswaldo Cruz; BrasilFil: Kamenetzky, Laura. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Houssay. Instituto de Investigaciones en Microbiología y Parasitología Médica. Universidad de Buenos Aires. Facultad de Medicina. Instituto de Investigaciones en Microbiología y Parasitología Médica; Argentin